Phil 2.20.12

9:30 – 3:00 FP

  • Biting the bullet and installing R on fgmdev. Installed, and working on getting all the packages in.
  • Installed the folllowing
    • install.packages(“Rserve”)
    • apt-get install r-cran-car then library(car)
    • install.packages(“vcd”)
    • apt-get install r-cran-gplots then library(gplots)
    • install.packages(“pwr”)
  • had to re-run library(gplots) so that plotmeans was visible correctly
  • After installing all the packages, I bounced Rserve, and then remembered that I had to bounce tomcat. Which took a *while* to restart.
  • everything appears to be running correctly 🙂

Here’s the current list:

Packages in library '/usr/local/lib/R/site-library':

colorspace              Color Space Manipulation
mvtnorm                 Multivariate Normal and t Distributions
pwr                     Basic functions for power analysis
Rserve                  Binary R server
vcd                     Visualizing Categorical Data

Packages in library '/usr/lib/R/site-library':

car                     Companion to Applied Regression
gdata                   Various R programming tools for data
                        manipulation
gplots                  Various R programming tools for plotting data
gtools                  Various R programming tools
multcomp                Simultaneous Inference in General Parametric
                        Models
mvtnorm                 Multivariate Normal and t Distributions

Packages in library '/usr/lib/R/library':

base                    The R Base Package
boot                    Bootstrap R (S-Plus) Functions (Canty)
class                   Functions for Classification
cluster                 Cluster Analysis Extended Rousseeuw et al.
codetools               Code Analysis Tools for R
datasets                The R Datasets Package
foreign                 Read Data Stored by Minitab, S, SAS, SPSS,
                        Stata, Systat, dBase, ...
graphics                The R Graphics Package
grDevices               The R Graphics Devices and Support for Colours
                        and Fonts
grid                    The Grid Graphics Package
KernSmooth              Functions for kernel smoothing for Wand & Jones
                        (1995)
lattice                 Lattice Graphics
MASS                    Main Package of Venables and Ripley's MASS
methods                 Formal Methods and Classes
mgcv                    GAMs with GCV smoothness estimation and GAMMs
                        by REML/PQL
nlme                    Linear and Nonlinear Mixed Effects Models
nnet                    Feed-forward Neural Networks and Multinomial
                        Log-Linear Models
rpart                   Recursive Partitioning
spatial                 Functions for Kriging and Point Pattern
                        Analysis
splines                 Regression Spline Functions and Classes
stats                   The R Stats Package
stats4                  Statistical Functions using S4 Classes
survival                Survival analysis, including penalised
                        likelihood.
tcltk                   Tcl/Tk Interface
tools                   Tools for Package Development
utils                   The R Utils Package
  • Came upon an interesting thing: http://rapache.net/ it’s a pretty slick VISIBILITY-ish looking thing. Need to spend some time figuring out how it works. Not all that clear yet.
  • OK, back to shaders and such.
  • And I just got why rendering the entire scene to a framebuffer that you then process is important. It’s because you can post process the texture (i.e. the entire scene) to get blur, bloom, and other effects. Cool. Well, I know what I’m doing tomorrow.